Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917781.1_cds_XP_016467329.1_60086
CDS Infomation

[gene=LOC107789964] [db_xref=GeneID:107789964] [protein=microtubule-associated protein TORTIFOLIA1-like] [protein_id=XP_016467329.1] [location=complement(join(94440..94874,95432..95991,96527..96635,96768..97571))] [gbkey=CDS]
Sequence

ATGTCGGTCCAGAGTAAGCAGAACCAGAATCAAACACGTGACATGAAGCACCGAGTTCTC
ACATGCCTCCACAAGCTTTCTGACCGTGACACGCATTCGGCGGCGGCTTCTGAACTCGAG
TCCATTGCTAAAACCCTTTCCCCTGAAACAATTCCTCCTTTTGTTTCCTCCATTGCCGCT
ACCGATTCCTCCGATAAATCTCCAGTCCGTAAACAATGCCTCCGCCTCATCTCTCTTCTC
TCCGAGCACCACGGCGACTCACTCTCTCCTCATCTCTCGAAGCTTCTCACCGCCGTCGTC
CGCCGCCTCCGTGATCCTGATTCCGCTGTACGCGCCGCCTGCGTGTCTGCTTGTGCTTCC
ATTTCGTCGCACTTGACTAGACCTCCGTTCTCATCCATTATCAAGCCGTTCCTGGAAGCG
CTTTTCACGGAACAGGAGATGAACTCGCAGATCGGCGCCTCCTTGTGCTTGGCGGCGGCT
ATCGAGGCGTCGCCAGATCCGGATATTGCCTGTTTGAGGAAGTCGTTGCCGAGATTTCAG
AAGTTGCTTAAAAGTGAGAGCTTCAAAGCGAAGGCAGCACTGCTTACGTTGATTGGCAGT
GTGATCGCAGTGGGAGGAGCTTCTAGTCAGCAGATTGTGAGGAATTTGGTGCCGTACTTG
GTTGAATTCATGAGTAGTGATGATTGGGCTGCTAGGAAATCCAGCGCAGAGGCTTTACAG
AGGCTTGCGGTAGTCGAAGGAGACGCTTTATCCGAGTTTAAAGCCTCGTGCTTGAAGACT
TTTGAAGCGAAACGATTCGATAAGGTAAAGGCAGTGAGGGAGACAATGAATCAAATGTTG
GAGGCATGGAAGGGAATCCCTGATTTGTCTGATGATGGTTCCCCTCCTCCCCAGTCAAAT
TCCTCTTCCAAAGAAATTGCAAGTGATGGACGTTACCCGCCTGGTTTGAAGACTTCCAGG
GCTGTGAGCTCCAGTACCCCTAGTGTAAAAAGACCGGCTAACAAGTCTTCTATAGCAGAT
GATTCAACTCCTTCTGCAGCCCGAAAAGGTCGTCCTCTGGACAGTAGTGAAAAGAAATCA
AGTCCAGCAATCTTTCGCAAACTTGATCGTAAGAAGCCATGGAAAGTTGAAGTTTCTGCT
TCTCATGGTTCTTCTGGGACCATCGCTTCCGAGGATGATCACCAAAATAAAGATGGGATA
AAGTTGGGCAAAGACAAGTTGGAAACACATGCAAGACCTGAAGTCAAACGGACTCTTTTC
AGTAAGATCACTAATGAAACCAAGAATGGTGTGGTGAAAACTGGATCTCGTGTGGTTCCG
TATCAAGATGAGATATCAGAAGCTAATGTAGTTGTGAGTAATGGAACTGGAGATCTCTGT
CGGAACCCAAAAGATTGTGAAGATCTCTCTTTGATCCGAAAACAACTGGTTCAAATTGAA
ACTCAGCAGTCCAATTTGTTAGAGCTTCTGCAGAAATTTATGGGGAGCTCACATAATGGC
ATGCGTTCTCTGGAGACACGTGTTCATGGTCTGGAGCTGGCATTAGATGAGATCTCATTT
GACTTGGCTATGTCAAATGGAAGGATGTCAAAAACCAACTCTGCAGCCACATGTTGCAAG
CTACCAGGTGCAGAATTCTTGACTTCAAAACTTTGGAAGAGAACAGAAGGTCGCGCCGCA
ACTTCACACTTTTCTGCTTCTGGTGGAGCCTCATCAGCAGGTGATATAAGCAACAAAGCT
GGTGAGCATGGAAATGGTGAAAGATTTAAGTTGGAGCATAGGAGATATCGGCTCCACAGT
AGTCGTGGGTTTATTGTGAACCCATTAGCTGAAATTCATGGTGACCCTCAAGGAATTTCC
GAACCTGCGATTGGTGGAGCTTCAAGAAATTTGCGAAATGGTGTATGA

Peptide Sequence

PEP ID

XP_016467329.1
PEP Infomation

PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Nicotiana tabacum]
Sequence

MSVQSKQNQNQTRDMKHRVLTCLHKLSDRDTHSAAASELESIAKTLSPETIPPFVSSIAA
TDSSDKSPVRKQCLRLISLLSEHHGDSLSPHLSKLLTAVVRRLRDPDSAVRAACVSACAS
ISSHLTRPPFSSIIKPFLEALFTEQEMNSQIGASLCLAAAIEASPDPDIACLRKSLPRFQ
KLLKSESFKAKAALLTLIGSVIAVGGASSQQIVRNLVPYLVEFMSSDDWAARKSSAEALQ
RLAVVEGDALSEFKASCLKTFEAKRFDKVKAVRETMNQMLEAWKGIPDLSDDGSPPPQSN
SSSKEIASDGRYPPGLKTSRAVSSSTPSVKRPANKSSIADDSTPSAARKGRPLDSSEKKS
SPAIFRKLDRKKPWKVEVSASHGSSGTIASEDDHQNKDGIKLGKDKLETHARPEVKRTLF
SKITNETKNGVVKTGSRVVPYQDEISEANVVVSNGTGDLCRNPKDCEDLSLIRKQLVQIE
TQQSNLLELLQKFMGSSHNGMRSLETRVHGLELALDEISFDLAMSNGRMSKTNSAATCCK
LPGAEFLTSKLWKRTEGRAATSHFSASGGASSAGDISNKAGEHGNGERFKLEHRRYRLHS
SRGFIVNPLAEIHGDPQGISEPAIGGASRNLRNGV

Transcript Sequence

Gene sequence data has not been registered.